Cottage Cheese Breakfast Muffins with Ham and Cheddar – FBD


Cottage Cheese Breakfast Muffins with Ham and Cheddar are perfect for meal prepping on the weekend and enjoying throughout the week for a quick breakfast. These delicious muffins contain a small amount of flour but are still low in carbs. You can easily switch out the flour for a Keto and Gluten-Free version; see notes for details!


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Cottage Cheese Breakfast Muffins with Ham and Cheddar finished muffins on serving plate


During my busy teaching days, having easy grab-and-go breakfasts like these cottage cheese muffins was essential. These Cottage Cheese Breakfast Muffins with Ham and Cheddar are a delicious variation of my regular Egg Muffins, perfect for a quick and satisfying breakfast.


Made with cottage cheese, ham, cheddar, and a few other ingredients, these muffins are like a cross between a biscuit and an omelet, offering a delightful taste and texture. Whether you're rushing out the door or enjoying a leisurely morning, these muffins are a convenient and tasty breakfast option.


What ingredients do you need?


(This is just a list of ingredients; scroll down for the complete recipe)



  • finely diced ham

  • grated sharp cheddar

  • green onions

  • cottage cheese

  • grated Parmesan

  • White Whole Wheat Flour (or Keto and Gluten-Free options)

  • Almond Flour

  • baking powder

  • salt

  • eggs

  • water


Can you customize these muffins?


You can easily swap out the cheese or meat in these muffins to suit your preferences. There are endless variations to try, including meatless options with vegetables. Feel free to get creative with the ingredients!


How low in carbs are these muffins?


These breakfast muffins are low in carbs, with only 7 net carbs and 17 grams of protein per serving!


How can you make them Gluten-Free and lower in carbs?


To make these muffins gluten-free and even lower in carbs, you can replace the flour with alternatives like Flaxseed Meal or Hemp Seeds. These substitutions offer a similar texture without the added carbs, making the muffins suitable for a Keto or gluten-free diet.


Looking for more breakfast ideas?


Explore our collection of Low-Carb and Keto Breakfast Muffins for more delicious options to enjoy in the morning. These muffins are perfect for a quick and satisfying meal on the go!


Cottage Cheese and Egg Breakfast Muffins with Ham and Cheddar process shots collageCottage Cheese and Egg Breakfast Muffins with Ham and Cheddar process shots collage


How to make Cottage Cheese Breakfast Muffins with Ham and Cheddar:


(Summary of the steps; scroll down for the complete recipe)



  1. Cut ham into small cubes, slice green onions, and prepare grated cheese.

  2. Combine cottage cheese, Parmesan, flour, almond flour, baking powder, salt, eggs, and water in a bowl.

  3. Stir in ham and cheese.

  4. Fill baking cups with the batter.

  5. Bake at 400F for 25-30 minutes until golden brown.

  6. Store muffins in the fridge and reheat when ready to eat.

  7. Enjoy these muffins for a quick and satisfying breakfast!


close-up photo of Cottage Cheese Breakfast Muffins with Ham and Cheddarclose-up photo of Cottage Cheese Breakfast Muffins with Ham and Cheddar


More Easy Breakfast Recipes from Kalyn:


Weekend Food Prep:


This recipe has been categorized under Weekend Food Prep, providing you with recipes you can prepare in advance for the week ahead!



Dice the ham, slice green onions, and measure out the grated cheese. text in your own words:

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